PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023900538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 36379.1 Da PI: 6.8313 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G g+W+++++ g+ R++k+c++rw +yl XP_023900538.1 13 RGLWSPEEDEKLVNYITTHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ +++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_023900538.1 66 RGSFSAQEERIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGHHCCSKQK VKRGLWSPEE DEKLVNYITT HGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS AQEERIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLLAQGL 120 DPNTHNLLPS HKTNDIHNNG CNFSHTNPKP TSLFSVNSLM TDASVNMNTP FSTLLSSPPT 180 DNNFSSPTIP IYELLNPNAV WTNQEQNPSS LMGSASSVSS SLLNPSGFDC VQENCMWSGS 240 FQPMEITKQD EMLQPEQQVL KPQLEMKDSE VEIKKADKLS DEQNNMAASF VNSNFDFGFM 300 ESTLMPCGMF YNGSPMDQFA WDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 2e-87 | MYB family protein |