PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899559.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 609aa MW: 65835.8 Da PI: 5.7246

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899559.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.5	6.3e-07	457	480	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+++F+r+++LkrH r+ H XP_023899559.1 457 FVCTLCSRRFRRQEHLKRHYRSlH 480 89*******************988 PP
2	zf-C2H2	29.8	1.4e-09	486	508	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+dCgk Fsr++nL +H+rtH XP_023899559.1 486 FECTDCGKKFSRSDNLSQHQRTH 508 89********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MEYAMHPPMG PTPFFYYNPQ ASPESEHQRQ HARFTPHPHA ANAMPTAVLP SSPEHLMACQ 60 QAMYQRPYST GAPQLQLQPA PAYISQAMLT PVASPRQHDY KPTILVQQEQ RSLMPLDTSA 120 CHGYYPATPT LSASGSFSSL DSPLPTADIL PTPVNGQMVF GTPSVTAFVK EGCEEEVLSE 180 VLAGGDWTRP GSPPMTPVFL HPANMKCADG SCTPLSPSPS PIHRVCAIED EVCDPRKLSI 240 GSAALAELSA IPLPTPATSH EENKAIFQGE LSTQQSRQQP QPQDFDQVTI ATSQDLVHYT 300 GLPTFEPIFE LDVEDDFSGL VTYSGPEAIH FNGTKRQRLD ILPGIIEDDG FFSEESFSDE 360 DDFATAGSFS PCGSDYSTPE NSMPATKSKR KQAKRVTDEA VLTTHAAGHH SSNESSSAAP 420 STTSEPSESA AATPTQSGGV SRRGRKQSLT DDPSKTFVCT LCSRRFRRQE HLKRHYRSLH 480 THDKPFECTD CGKKFSRSDN LSQHQRTHGA GTMIMGVLTQ PMSDGMQQPI ESVNGGDSGS 540 LIRPKSQDSF QSHASVSQRV SPDAGQLGAV LFDVTAQVAG SSSSSAGYSD SDSSQGSDDK 600 SSKKRKREE

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MEYAMHPPMG PTPFFYYNPQ ASPESEHQRQ HARFTPHPHA ANAMPTAVLP SSPEHLMACQ  60
QAMYQRPYST GAPQLQLQPA PAYISQAMLT PVASPRQHDY KPTILVQQEQ RSLMPLDTSA  120
CHGYYPATPT LSASGSFSSL DSPLPTADIL PTPVNGQMVF GTPSVTAFVK EGCEEEVLSE  180
VLAGGDWTRP GSPPMTPVFL HPANMKCADG SCTPLSPSPS PIHRVCAIED EVCDPRKLSI  240
GSAALAELSA IPLPTPATSH EENKAIFQGE LSTQQSRQQP QPQDFDQVTI ATSQDLVHYT  300
GLPTFEPIFE LDVEDDFSGL VTYSGPEAIH FNGTKRQRLD ILPGIIEDDG FFSEESFSDE  360
DDFATAGSFS PCGSDYSTPE NSMPATKSKR KQAKRVTDEA VLTTHAAGHH SSNESSSAAP  420
STTSEPSESA AATPTQSGGV SRRGRKQSLT DDPSKTFVCT LCSRRFRRQE HLKRHYRSLH  480
THDKPFECTD CGKKFSRSDN LSQHQRTHGA GTMIMGVLTQ PMSDGMQQPI ESVNGGDSGS  540
LIRPKSQDSF QSHASVSQRV SPDAGQLGAV LFDVTAQVAG SSSSSAGYSD SDSSQGSDDK  600
SSKKRKREE