PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023899435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27594.3 Da PI: 8.9961 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.1 | 8.5e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_023899435.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 92.1 | 9.6e-31 | 86 | 175 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ea + s+qqe+ +Lk+++e Lqr+qR+l+GedL++Ls k+L++Le+qL slk iRs++++++l+q+++lq+ke+ l+e+nk+L+++l+e XP_023899435.1 86 EALELSSQQEYLRLKARYEDLQRSQRNLMGEDLGPLSSKDLESLERQLAVSLKLIRSTRTQYMLDQLNDLQRKEHVLNEANKSLKQRLME 175 4555689*******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFSST 60 SSMLKSLERY QKCNYGAPEP NVSTREALEL SSQQEYLRLK ARYEDLQRSQ RNLMGEDLGP 120 LSSKDLESLE RQLAVSLKLI RSTRTQYMLD QLNDLQRKEH VLNEANKSLK QRLMEGYELQ 180 LNPSVNDMGY GRQHAQPQSD FFHPLDCEPT LHIGYPSDQA VSVVTNSAPT LNNYMSGWMP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-119 | MIKC_MADS family protein |