PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899387.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 643aa MW: 70399.5 Da PI: 8.0214

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	474	497	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C+ +F++k + +rH+++ H XP_023899387.1 474 YTCQYCPNRFKNKNEAERHQNSlH 497 9********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MAIPRARHEA PPPPLPPPTY LPEISAGHDP GWQWANNPDS VDFGRQAAVK PGSSLLLGRA 60 TSTGLVGSED EPSTNYVTHN STPRARWTSS NPSHNMARDH TLPEGSRTPS DGETSPRHAY 120 HHFDRSHGER RLGSERQLER RTLDESSQSY DKQLLSRIGG PNTPSRQSIS QPNSHEIATP 180 AQLETERRNG HQLRPLSMSD QKQMNIDSPS SARWSGAVSP GHNWTEHGPP DIRSATSRHS 240 SLAIDSGISH RGSYDQSMFI HEDLLEEGPM STLQIHDRSP SGSDDVVIGG PRAGSKRRAS 300 SPPRDFNPED RSSVSSTSGQ SEIYLRRPLQ QLPTRETSAI GRFQPSHSSL SSTSSFGPRH 360 NSLGSSLGIA SIPSSATSYG SDRLSPNALL PAAVVEAATH PAGVKMVQSA PLHQRASSES 420 TQALGHLPND PTSYARHSNM SHMQGVYMCE CCPKKPKKFD SKDELRSHES EKQYTCQYCP 480 NRFKNKNEAE RHQNSLHLRR HSWSCAALSG IEAAFHASSS GTGIDVCGYC GEEFSNPPQW 540 DLRAEHLNHT HKIGECNQAK KFFRADHFRQ HLKHSHAGTS GKWTNMLENA CMKDEPPPEK 600 RVNTMNGAGA PGPPPPALMI MTSGLSGPTS HGQKPIEENP RDC

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MAIPRARHEA PPPPLPPPTY LPEISAGHDP GWQWANNPDS VDFGRQAAVK PGSSLLLGRA  60
TSTGLVGSED EPSTNYVTHN STPRARWTSS NPSHNMARDH TLPEGSRTPS DGETSPRHAY  120
HHFDRSHGER RLGSERQLER RTLDESSQSY DKQLLSRIGG PNTPSRQSIS QPNSHEIATP  180
AQLETERRNG HQLRPLSMSD QKQMNIDSPS SARWSGAVSP GHNWTEHGPP DIRSATSRHS  240
SLAIDSGISH RGSYDQSMFI HEDLLEEGPM STLQIHDRSP SGSDDVVIGG PRAGSKRRAS  300
SPPRDFNPED RSSVSSTSGQ SEIYLRRPLQ QLPTRETSAI GRFQPSHSSL SSTSSFGPRH  360
NSLGSSLGIA SIPSSATSYG SDRLSPNALL PAAVVEAATH PAGVKMVQSA PLHQRASSES  420
TQALGHLPND PTSYARHSNM SHMQGVYMCE CCPKKPKKFD SKDELRSHES EKQYTCQYCP  480
NRFKNKNEAE RHQNSLHLRR HSWSCAALSG IEAAFHASSS GTGIDVCGYC GEEFSNPPQW  540
DLRAEHLNHT HKIGECNQAK KFFRADHFRQ HLKHSHAGTS GKWTNMLENA CMKDEPPPEK  600
RVNTMNGAGA PGPPPPALMI MTSGLSGPTS HGQKPIEENP RDC