PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899207.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 389aa    MW: 43088.4 Da    PI: 8.5584
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.000222773141254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk L
  XP_023899207.1 277 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFL 314
                     7788899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MELEATMLFG PQMSLFMSTI CRNNNFNSNF DGVFSNPRES KQDNDILAPC LNNSMVQDLS  60
FYWLSNAGSS NSQSAHDLKI KEERSESFRK YTELLHSSSE DYHFAPTSHI KNERNDLSEK  120
LLLKTISTKG FYSNAQNCPS FGGVAMPSRG NFSQIYPSIN ISNLNQSPSS SEISRSLDMN  180
LQALNLLTPE RYSGSFSQPS HDSLGLFKAS PSFGLDHMHM QQLTHRPSFS PNNISPFTNR  240
ITEEKRPSSL MEAKTAQAAS KKSRLEPRAS CPPFKVRKEK LGDRIAALQQ LVAPFGKTDT  300
ASVLMEAIGY IKFLHNQIET LSVPYMKSSR NKACRTMQAG SVDDGNEEQK RDLRSRGLSL  360
VPLSCMSYVT GDSGGGGIWP QPNYGGGGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.18e-81bHLH family protein