PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899206.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 410aa    MW: 45253.4 Da    PI: 8.4536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.000242983351254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk L
  XP_023899206.1 298 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFL 335
                     7788899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MESANLHHQH QLPDQLVGSS SLTNPTYYGV GSNHAVWTPN VTLNNNFNSN FDGVFSNPRE  60
SKQDNDILAP CLNNSMVQDL SFYWLSNAGS SNSQSAHDLK IKEERSESFR KYTELLHSSS  120
EDYHFAPTSH IKNERNDLSE KLLLKTISTK GFYSNAQNCP SFGGVAMPSR GNFSQIYPSI  180
NISNLNQSPS SSEISRSLDM NLQALNLLTP ERYSGSFSQP SHDSLGLFKA SPSFGLDHMH  240
MQQLTHRPSF SPNNISPFTN RITEEKRPSS LMEAKTAQAA SKKSRLEPRA SCPPFKVRKE  300
KLGDRIAALQ QLVAPFGKTD TASVLMEAIG YIKFLHNQIE TLSVPYMKSS RNKACRTMQA  360
GSVDDGNEEQ KRDLRSRGLS LVPLSCMSYV TGDSGGGGIW PQPNYGGGGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-80bHLH family protein