PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023898661.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 371aa MW: 41874.6 Da PI: 8.5239

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023898661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.7e-32	195	248	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023898661.1 195 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 248 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	196	247	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023898661.1 196 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 247 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MELFPAQPDL SLQISPPNNK PTSSWMRSTE EEVDLGFWKR AFDSRNSMSS MAKPDTCFEL 60 SLSNPRPSDH HSSLTNHNHH LQNGNGNLFH TFPQQNHYSH HQNQHQHQLH HQPLFQQPTQ 120 GLSPELGFLR PIRGIPVYQN PPPFPFAQQP LDVSHQPSSI SIPNTTSSSS PFQSQGLLRS 180 RFLSRFPAKR SMRAPRMRWT TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK 240 SHLQMYRTVK TTDRAAASSG QSDVFENGSS GDTSEDLMFE IQNPRRPELS IQQGRPTAQE 300 KDYQGLWSNS SSREAWLHGK PRDSCGNIPS LEDMDPKCLS YERISDVSSS TNHSGASPKK 360 PNLEFTLGRP L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MELFPAQPDL SLQISPPNNK PTSSWMRSTE EEVDLGFWKR AFDSRNSMSS MAKPDTCFEL  60
SLSNPRPSDH HSSLTNHNHH LQNGNGNLFH TFPQQNHYSH HQNQHQHQLH HQPLFQQPTQ  120
GLSPELGFLR PIRGIPVYQN PPPFPFAQQP LDVSHQPSSI SIPNTTSSSS PFQSQGLLRS  180
RFLSRFPAKR SMRAPRMRWT TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK  240
SHLQMYRTVK TTDRAAASSG QSDVFENGSS GDTSEDLMFE IQNPRRPELS IQQGRPTAQE  300
KDYQGLWSNS SSREAWLHGK PRDSCGNIPS LEDMDPKCLS YERISDVSSS TNHSGASPKK  360
PNLEFTLGRP L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-75	G2-like family protein