PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023898498.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 330aa    MW: 36891.4 Da    PI: 5.1292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023898498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-13129180155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  XP_023898498.1 129 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 180
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MALEAVVFPQ DPFGYGGKDL YNLLGGGGGS WSYDFGLAKE DEQTGSFDFL ESQTESCLYG  60
DYNSSPPDSM VPNLHHEVLQ HSNPSLSSTD ATMLTPYESQ QGDNSTAMST RPKRRRAKSR  120
KNKEEIENQR MTHIAVERNR RKQMNEYLSV LRSLMPDSYV QRGDQASIIG GAINFVKELE  180
QRLQFLGASK EMESKSEADT SLPFSEFFTF PQYSTSSSHC ENSMAMSETD THQVGVAQLA  240
IADIEVTMVE SHANLKIRSK RRPKLLLKVV SGLQGMRLTV LHLNVTTFDE VVLYSLSVKV  300
EDECKLSSVD EIATAVHQML GRIQEEPLLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130141RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-81bHLH family protein