PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023898449.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 918aa MW: 100997 Da PI: 6.7614 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56 | 7.2e-18 | 333 | 432 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_023898449.1 333 FEKMLSASDAGRIGRLVLPKACAEAYfpAISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 425 89**************************666667778***************9989999999***9.********************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 l +++++ XP_023898449.1 426 LIMGFRK 432 7777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 918 aa Download sequence |
MASSNSKKTC MNVLCGESTS ADSKKGWALR SGDFAKLCDK CGSVYEQSIF CDVYHSKDSG 60 WRECTSCGKR LHCGCITSIS LVELLDCGGV SCINCAKNTG LVPISSNEKP DGFGTSKVDN 120 VNELHPSSMD TQLDGNSIEK LKLMQLGNSI EGNGLRHLLQ SHNADTIGSF GKLKEEEVFP 180 SVGEIGTACF SNFDQACNGS SNTTKPDIYK ANMGTKDIYE SLPQTNLSMT LGAPSGNSSP 240 LPSAVVDERE NRKTSSPFLQ GPRSRHLLPK PPRSALAGGL EANAGMVSQI RVARPPAEGR 300 GRNQLLPRYW PRITDQELQQ ISGDSNSTIV PLFEKMLSAS DAGRIGRLVL PKACAEAYFP 360 AISQPEGLPL RIQDVKGKEW VFQFRFWPNN NSRMYVLEGV TPCIQSMQLQ AGDTVTFSRM 420 DPEGKLIMGF RKASNSVAMQ DTYPSAIPNG AHSSETLFSG IFENLPIISG YSGLLQSLKG 480 SADPNLNALS KHLSSATGDI SWHKSEKLED RTREGLLLLP ERKKARNIGS KSKRLLIDSQ 540 DVLELKLTWE EAQDLLYPPP TFKPSIVMIE DHEFEEYEEP PVFGKRSIFV ARSTGVQEQW 600 AQCDSCSKWR RLPVDILIPP KWTCADNAWD QSRCSCSAPD ELNPRELENL LRLNKEFKKR 660 RTMTSNRPNQ GHESSGLDAL ANAAILGDSV GDPGTTSVAT TTKHPRHRPG CSCIVCIQPP 720 SGKGKHKPTC TCNVCMTVKR RFKTLMMRKK KRQSEREAEI AQRNQQTWGS RDEAEVDSTS 780 RHASSHLDPS ENEARSANEL ESKSQSKLVD TGKGHLDLNC HPDREEELQA GSKRMSMMSL 840 LQEASLPLET YLKQNGLTLT SLITEQQASS ASQIPPQASN ENEGQLNEDC CFVSAEQERE 900 GSREEYCGPD PSQNDAQS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 739 | 750 | KRRFKTLMMRKK |
2 | 739 | 752 | KRRFKTLMMRKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 0.0 | B3 family protein |