PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023898038.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 432aa    MW: 48312.4 Da    PI: 7.9018
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023898038.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.5e-08372427147
                      TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 
                      r+ WT+eE+  l+++v+ +         W++I +       k Rt+ ++k++w++ 
   XP_023898038.1 372 RLLWTPEEENMLKEGVHHFSASakknvPWRKILELGRhifhKSRTPADLKDKWRTM 427
                      677*****************99***********9999****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MRSKSGRGGR PKHSLSTSSS PSITTSLPML FNHKHSQFTL DEDSICGEMP NAQLHNDVAP  60
DLDDHTLASK TRVHCSTSHD ISTQDDDMEI DCFKQTCIIC NQGGHVSVCT EPGCPIALHK  120
KCLSRELISD GDNLEQFYCP YCLHKRALVQ KQQLRKKVEL AKEDLLKFLG TNAVGGDGLK  180
QKDGEEKMRQ DQCNTDEQMT EDGALDASKG SQGGLKTHEE NISEAHQSKF AEVVENIQVE  240
MTEDGALDSS KGGSMDGLKV SEENKSRSKD EEQMQPKSPK QTSNADFASG TMDSDMEILA  300
ARVCRIKQRA QKKAFPQNDD SPMKLSSQED STTEKKVTSK NKKHAASKKS RQPQVSTKQF  360
TTMPFPTAKR KRLLWTPEEE NMLKEGVHHF SASAKKNVPW RKILELGRHI FHKSRTPADL  420
KDKWRTMLAK EP