PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023897889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 559aa MW: 61506.8 Da PI: 7.4878 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.3 | 8e-42 | 179 | 254 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023897889.1 179 CQVYGCHKDLSSSKDYHKRHKVCEIHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 254 **************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 559 aa Download sequence |
MESWNCVSEG KDFESDETIL PANNSLSRSK NCLLGRELRT PCSFGNDLLV SSQQAVENQR 60 FGELGFPEMI GRQLNHNSTS EVVRSSKVGG EHVVNPVMSM PNGFSGEDDS TSKLSSSVAD 120 SNSRDSSFFD LNLGRLADIR DAHNSKFSKG TTILLSSSES SSPAKRVRAS GMHSQTSFCQ 180 VYGCHKDLSS SKDYHKRHKV CEIHSKTAKV IVNGIEQRFC QQCSRFHLLA EFDDGKRSCR 240 KRLAGHNERR RKPQGSRYQG SPLTTTSFVC QEIPPSGLFQ PEKYGTSDWC RHIKIEGGSD 300 YRPMTTFPIT NGNQHSKSLF PTYNIEKQFP PFHDSGANTT TGSIFSENAS QYTHDIGGQN 360 SSSRSFFQSA SGSEDFSVFD AASTAQGLSG ISDSGCALSL LSSQSQNSSS HSSGIPMARP 420 LIMPGSHPHY GMSRVSEKFI GVSSQASPSG ASNKFISSEM NSAEENHLGH VFISDSSDAI 480 NLEIADGIFQ GSDFLHSSDR HSCESGPTID LLQLSSELHR VEHQRQSLQV KQENDAQQAR 540 QGERYHRMLQ NIRQPKLKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 7e-47 | SBP family protein |