PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023897888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 559aa MW: 61190.2 Da PI: 6.9472 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.6 | 6.2e-42 | 179 | 254 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023897888.1 179 CQVYGCHKDLSSSKDYHKRHKVCEIHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 254 **************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 559 aa Download sequence |
MESWNCVSEG KDFESDETIL PANNSLSRSK NCLLGRELRT PCSFGNDLLV SSQQAVENQR 60 FGELGFPEMI GRQLNHNSTS EVVRSSKVGG EHVVNPVMSM PNGFSGEDDS TSKLSSSVAD 120 SNSRDSSFFD LNLGRLADIR DAHNSKFSKG TTILLSSSES SSPAKRVRAS GMHSQTSFCQ 180 VYGCHKDLSS SKDYHKRHKV CEIHSKTAKV IVNGIEQRFC QQCSRFHLLA EFDDGKRSCR 240 KRLAGHNERR RKPQGIHTGR AGRYLQSYND IAGSRYQGSP LTTTSFVCQE IPPSGLFQPE 300 KYGTSDWCRH IKIEGGSDYR PMTTFPITNG NQHSKSLFPT YNIEKQFPPF HDSGANTTTG 360 SIFSENASQY THDIGGQNSS SRSFFQSASG SEDFSVFDAA STAQGLSGIS DSGCALSLLS 420 SQSQNSSSHS SGIPMARPLI MPGSHPHYGM SRVSEKFIGV SSQASPSGAS NKFISSEMNS 480 AEENHLGHVF ISDSSDAINL EIADGIFQGS DFLHSSDRHS CESGPTIDLL QLSSELHRVE 540 HQRQSLQVKQ ENDAQQARD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 9e-50 | SBP family protein |