PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023897506.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 264aa MW: 28862 Da PI: 4.5429 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 7e-17 | 72 | 122 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+eI++p + r k+ +lg+f+ta++A a+++a+++++g XP_023897506.1 72 CNYRGVRQRT-WGKWVVEICEP---N-RgKKLWLGTFDTADDATSAYDEAARAIYG 122 56*****999.*******9998...3.35***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MGYLDQGVPM ESSKKRKTRG EGLSVAETLA KWRDYNAQLE SSGGDAKPTR KHSKGPKKGC 60 KKGKGGPENS GCNYRGVRQR TWGKWVVEIC EPNRGKKLWL GTFDTADDAT SAYDEAARAI 120 YGASARLNFL ESVSTVSGPT PARFKASANE EIQYAVTEAA SLVETNVKDE STAMPSTSSL 180 IKDESTGDNG QKELMAYSKN ELFDDAELTA LFEDIPLDFT YSVLDFGFDV NQLGFPDIEV 240 DMPSLVDTEG KDKLVNEYFD ADVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 8e-35 | ERF family protein |