PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023897139.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 312aa    MW: 35192.3 Da    PI: 6.3171
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023897139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.73.3e-21123223198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l +sdv++++r++lpkk ae+h   ++++e++ + + d++g  +W++k++y  +++s++yvl+ ++ eFv+a+gL+ gDf++++   + ++
  XP_023897139.1 123 FQKELRNSDVSSLRRMILPKKAAEAHlpILDSKEGILINMDDLDGlHVWSFKYRYwpNNNSRMYVLE-NTGEFVNAHGLQLGDFIMIYQ--DnQN 214
                     99**************************55556899*********9*********89999999***9.********************3..4377 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                      ++v+++++
  XP_023897139.1 215 HNYVIQARK 223
                     778888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMNMMDQLHE KTEVASGFVA GGEAELGLVT VQGDKTKATT NHGSGSDSTG STRHDLVSAV  60
SGFRVLHRRK RMARQRRSSS STIKLLSFVP SSSTSQVPSS PLPGLRPTLP AREIDPRRLR  120
FLFQKELRNS DVSSLRRMIL PKKAAEAHLP ILDSKEGILI NMDDLDGLHV WSFKYRYWPN  180
NNSRMYVLEN TGEFVNAHGL QLGDFIMIYQ DNQNHNYVIQ ARKASEQDVY SDITRNDAND  240
LFLYDYEPYR PSSLFENYPT DNATSMSFIY DTTTFSNDSP LDFLGGSMTS YSRIGSLEGF  300
GSVDNFSLDD FY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-92B3 family protein