PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896812.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 451aa MW: 49922.8 Da PI: 5.9976

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	41	85	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G g W+ I +++g ++t+ q++s+ qk+ XP_023896812.1 41 REKWTEEEHQKFLEALKLYGRG-WRQIEAHIG-TKTAVQIRSHAQKF 85 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDIQGQNELT TSNADNYHPD GSVKSETAVK VRKPYTITKQ REKWTEEEHQ KFLEALKLYG 60 RGWRQIEAHI GTKTAVQIRS HAQKFFSKVV RASSSSSESS IEPVEIPPPR PKRKPLHPYP 120 RKLVDSLNGI SVADQSERSP SPNSLVAEKD TESPTSVFSA VGSDALGSAI SEQHNVCPSP 180 MSCTTDMHSI SLATVEKENE HMMVNSSVQD ERLQKFESAS KETLSTDGDE AMGAIVSSIK 240 LFGRTVLVTD SQKPCSPGAG NIDSPTSKTI LVNLDIDTEK LPETLPSNQL DTHLSLEIVN 300 CDWRLLPCRA PVQCVEHQKE NTNSAEANPY ASLPWLALYQ GLPYYHLPSY NQTSVQIPTY 360 SCVEEKTKER DILKEKSCSG SNSVSASEVE NEGKNLDAVD SQFQETKGRI NPCKSMKGFA 420 PYKRCLAERD ANSSVIVLEE REGQRARVCS Y

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDIQGQNELT TSNADNYHPD GSVKSETAVK VRKPYTITKQ REKWTEEEHQ KFLEALKLYG  60
RGWRQIEAHI GTKTAVQIRS HAQKFFSKVV RASSSSSESS IEPVEIPPPR PKRKPLHPYP  120
RKLVDSLNGI SVADQSERSP SPNSLVAEKD TESPTSVFSA VGSDALGSAI SEQHNVCPSP  180
MSCTTDMHSI SLATVEKENE HMMVNSSVQD ERLQKFESAS KETLSTDGDE AMGAIVSSIK  240
LFGRTVLVTD SQKPCSPGAG NIDSPTSKTI LVNLDIDTEK LPETLPSNQL DTHLSLEIVN  300
CDWRLLPCRA PVQCVEHQKE NTNSAEANPY ASLPWLALYQ GLPYYHLPSY NQTSVQIPTY  360
SCVEEKTKER DILKEKSCSG SNSVSASEVE NEGKNLDAVD SQFQETKGRI NPCKSMKGFA  420
PYKRCLAERD ANSSVIVLEE REGQRARVCS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	5e-52	MYB_related family protein