PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896800.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ARR-B
Protein Properties Length: 740aa    MW: 81768 Da    PI: 5.0273
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like811.4e-25206258255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     p++ Wt+ LH+rF+ea++++ G +kA+Pk+ile+m+v gLt+e+v+SHLQkYRl
  XP_023896800.1 206 PKVIWTTSLHNRFLEAIRHI-GLDKAVPKRILEIMNVRGLTRENVASHLQKYRL 258
                     899*****************.********************************7 PP
2Myb_DNA-binding31.34.9e-10210257448
                      S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      WTt ++ ++++a++  G +   +k+I + m+  g+t++++ s++qky+
   XP_023896800.1 210 WTTSLHNRFLEAIRHIGLDkaVPKRILEIMNvRGLTRENVASHLQKYR 257
                      ***********************************************7 PP
3Response_reg81.23.4e-27251311109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                     +l+vdD+ + + ++  +l+  +y +v +++++ +al++l+ +++Dl+++D+ mp m+Glel k+ +ee  klp+i+++a +ee+ +l+ l+ Ga 
  XP_023896800.1  25 ILVVDDDTTSLAIVSAMLRTWKY-DVVAVRNPLDALATLRMQKFDLVITDLHMPVMNGLELQKQVEEEF-KLPVIMMSADDEENAMLKSLEGGAA 117
                     89*********************.*****************************************9999.************************* PP

                     EEEESS--HHHHHH CS
    Response_reg  96 dflsKpfdpeelvk 109
                      + +Kp++pe+l +
  XP_023896800.1 118 FYMVKPVSPEDLKN 131
                     ***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 740 aa     Download sequence    
MAMASVRVRV DQSFKNKTPI VDIHILVVDD DTTSLAIVSA MLRTWKYDVV AVRNPLDALA  60
TLRMQKFDLV ITDLHMPVMN GLELQKQVEE EFKLPVIMMS ADDEENAMLK SLEGGAAFYM  120
VKPVSPEDLK NLWQYAVAAK RGKSVVIEEV KNTPAKSSVV SCEKKQSAES SVNQEKHDKK  180
DSKRKGAPKK GKEDGNQKSR GARKRPKVIW TTSLHNRFLE AIRHIGLDKA VPKRILEIMN  240
VRGLTRENVA SHLQKYRLFL KRVAERGLYT SKGLSMRSSF ASGLPPSLIF KNFQQNYPQF  300
PEQQQRRTSM FQPGFGGNFM TLNGSVLGGI PSNRASSSGA QFGYGDSFNA LNIGPAHFPV  360
KHNSSSSNFV PQLGQEQWRS SNNLQQPLFG NINGPPLYQA NRPIFANNVG LNFPSLGDMT  420
CGPKNNATNG LVNTSNCNDT YPQQAQPIRP HLRNDSMLNY NFYTPGILNP SYIPETANNN  480
TGSLNSSNAA QNFGNNNGVN AGIQITNGRE LIGTNEKSFN DNGTPNGRYS GYGMLNGNND  540
NIGLATMGNG TFGKNMEQGE SSSAGFENAN QLQPWFNNVN QQENGLPIFQ TQSQQQPNLV  600
NGGENDYSYD DLLNAISLMP NLGEDDLNEL FLEETYNQPP SQQQGEEEEP FEENPLVNEL  660
QILELSGSSS LEENPPLSEP AFSQNQGGEQ LVDLDFDVDM FISAESPDQN LNQQQLVSSN  720
DLYGTSQVEN NVNTPLESQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07210.14e-56ARR-B family protein