PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023896597.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 342aa MW: 38441.1 Da PI: 4.6087 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71 | 3e-22 | 4 | 139 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy.kvePwdLp.k....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 +Gfr++Ptdeel++ L kkv++ + ++++ ++++++iy k+ Pw++ + ++++ ++++y F+ k++tg+r ra++ g+W ++ XP_023896597.1 4 VGFRYDPTDEELMKI-LMKKVNDVEqthlnHHFDYIVNDCEIYgKIPPWEIYdShahyHLHTFRRKLYVFTD--LKTTTGNRVCRAAACGTWLEK 95 7************66.5555555443566444444699999995679****632343333334446666665..567899*************** PP NAM 87 gkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 k k++++++g+++g+ ++L f + +++k +kt+W+mhe++l XP_023896597.1 96 SKPKRMYDSQGNVIGINRMLSFKAKdlQSSKFNKTNWIMHEFSL 139 ***********************5534777888*********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 342 aa Download sequence |
MEMVGFRYDP TDEELMKILM KKVNDVEQTH LNHHFDYIVN DCEIYGKIPP WEIYDSHAHY 60 HLHTFRRKLY VFTDLKTTTG NRVCRAAACG TWLEKSKPKR MYDSQGNVIG INRMLSFKAK 120 DLQSSKFNKT NWIMHEFSLT KQEFGRINTV LCVIYKLNKG SGSDCEEANG RGLKRAFSST 180 TAGEEFSCFS TTAAAMISLE PEPEPEPEPE MPSADDEEFA AWVYGCFSST AAVAQEVSTF 240 NTTGVMSHGQ EDDQAQEHKK RRLDAVADAD ASTDKEFAAL IADPTFPDEP LSQIFSDLPP 300 LVEVCSQSKS DPVADADFDA LITSLISDPT QSDEAWCKIF CI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G27410.2 | 4e-15 | NAC family protein |