PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896548.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 370aa MW: 42304.2 Da PI: 7.7979

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.1	6.4e-31	66	119	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+e+LGG+e+AtPk +l+lm++k+L+++hvkSHLQ+YR+ XP_023896548.1 66 PRLRWTPDLHLCFVQAIERLGGQERATPKLVLQLMNIKSLSIAHVKSHLQMYRS 119 8****************************************************7 PP
2	Myb_DNA-binding	47.7	3.7e-15	67	118	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+a+++lGg t+k++ + m+ k ++ ++ks++q+y+ XP_023896548.1 67 RLRWTPDLHLCFVQAIERLGGQeraTPKLVLQLMNiKSLSIAHVKSHLQMYR 118 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MNMMENENND GLKMQSSDRS EDEEVEDESK TKNSASSSNS IVEVEEAERK TSSSSGVRPY 60 VRSKVPRLRW TPDLHLCFVQ AIERLGGQER ATPKLVLQLM NIKSLSIAHV KSHLQMYRSK 120 KIDDQGQVIT SSGHLKGHLM GSENHLWQQS LLQSVNEGVT PKFRYGDFSW NGHGSWISRP 180 YLTENMYIRT GDSLHGSVAE RIYGGTGSNI RDIGAFYMND NIAFAEQSRK RKLQEFREEF 240 QWLSNHNSSE TQTRSTPIEP SFNNELHGRV WERTNCFQNS ITVNTKSINV KRYGEQNIGK 300 WKALHDIDLS LSLGRRSRQE EVKRIPWVEE KVDGNYSIDL NMPSKLSSLI QENSAKNMKL 360 ESTSTLDLTI

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MNMMENENND GLKMQSSDRS EDEEVEDESK TKNSASSSNS IVEVEEAERK TSSSSGVRPY  60
VRSKVPRLRW TPDLHLCFVQ AIERLGGQER ATPKLVLQLM NIKSLSIAHV KSHLQMYRSK  120
KIDDQGQVIT SSGHLKGHLM GSENHLWQQS LLQSVNEGVT PKFRYGDFSW NGHGSWISRP  180
YLTENMYIRT GDSLHGSVAE RIYGGTGSNI RDIGAFYMND NIAFAEQSRK RKLQEFREEF  240
QWLSNHNSSE TQTRSTPIEP SFNNELHGRV WERTNCFQNS ITVNTKSINV KRYGEQNIGK  300
WKALHDIDLS LSLGRRSRQE EVKRIPWVEE KVDGNYSIDL NMPSKLSSLI QENSAKNMKL  360
ESTSTLDLTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-46	G2-like family protein