PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023896384.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 273aa    MW: 30628.3 Da    PI: 5.6485
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023896384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023896384.1 165 SHSLAERVRRGKINERLKCLQDIVPGC----YKSMGMAVMLDEIINYVQSLQ 212
                     8*************************8....3569999***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MAEFTADMQG FRPSFPVLDI DQNMDIINQY AGLNPSVLET SNLDFQCYNP FSNGNVFSHQ  60
APEFTANLAE TIPATFHEFN QNVMPAAQHI NVTAAGNESH ESQKRKAMDM SESSSGTSSP  120
LVSEDVIKKK KNSGRGKRVK SNEKELENPM EVVHVRARRG QATDSHSLAE RVRRGKINER  180
LKCLQDIVPG CYKSMGMAVM LDEIINYVQS LQNQVEFLSM KLTAASLFYD FNSETDALET  240
MQRTKANEAK ESERLMREGY GGLDSFHSNW SPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.16e-64bHLH family protein