PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896289.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ERF

Protein Properties

Length: 155aa MW: 17497 Da PI: 6.871

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	31	6.2e-10	23	49	28	54
AP2 28 rkrfslgkfgtaeeAakaaiaarkkle 54 ++r++lg+f+tae+Aa+a+++a++ + XP_023896289.1 23 KTRIWLGTFDTAEDAARAYDEAARLMC 49 49*********************8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MGCVFTTLWH MVHLRLHFII VRKTRIWLGT FDTAEDAARA YDEAARLMCG PKARTNFPYN 60 PNAPLNKLLS ATLTAKLHKC HLASLQTAKK PVQKEPQFTM SSHQNSGQTG FVEGQGETST 120 DNQQFMPLED DHIEQMIEEL LYYGSIEVCN VSVPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25190.1	8e-41	ERF family protein