PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023896072.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 593aa MW: 65431.8 Da PI: 6.2412

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023896072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.2e-09	424	465	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++WT++E ++++da +++G++ ++ I+++++ +t+ q+k +++ XP_023896072.1 424 DPWTEDETDRFYDALRMFGTD-FDIISKMFP-PKTRMQVKKKFN 465 69*****************.*******.789999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MAELEVRSVL QKGDERRCDP ESSWCGLSRQ SIMHSTCHAG LTTIAYAPNF LHVTEPPCYE 60 CCAIMISSAV GGKRAAPKAA ARRRAPTKSQ PVLPAEDAPP ETRPPSSPAP ANDAARDTTS 120 VTTATSALIL PTVVASSASD IIPRVETPRG ALATSPAVLN SQPICDDRGQ PGADDHETAQ 180 PQVLSTAAAE ISSPAQRVKP RARPLGARRN KRRRALSVIE SGHGIDSQER GSPHPENSGP 240 KKQQRKARKT RGANVSDIGS NGGAAAGEVD PANFTMFELS YSSKHGERSE REKKMADIDW 300 AEVSRKRQEE VERIQAGQKV DKSNADQVAE SADPTDRPID ITPASQLDGE EATGIGLRIV 360 NGQIVEDETT LSIDQTAQAH ANANNDDEVE EENDLAERLN RTTYLNDRRR DPRERIPVYK 420 SKSDPWTEDE TDRFYDALRM FGTDFDIISK MFPPKTRMQV KKKFNREERI DLARINAALL 480 GKENKPMDLE HYAREVGEDV SVYMKYESYE HASQIIRESM KEREEELAAA LKENTETQRQ 540 QDIQQKQQEA VEKKKLEKKE KAAARRANKG RKPGLGTMGG GGPEEVVVET TER

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MAELEVRSVL QKGDERRCDP ESSWCGLSRQ SIMHSTCHAG LTTIAYAPNF LHVTEPPCYE  60
CCAIMISSAV GGKRAAPKAA ARRRAPTKSQ PVLPAEDAPP ETRPPSSPAP ANDAARDTTS  120
VTTATSALIL PTVVASSASD IIPRVETPRG ALATSPAVLN SQPICDDRGQ PGADDHETAQ  180
PQVLSTAAAE ISSPAQRVKP RARPLGARRN KRRRALSVIE SGHGIDSQER GSPHPENSGP  240
KKQQRKARKT RGANVSDIGS NGGAAAGEVD PANFTMFELS YSSKHGERSE REKKMADIDW  300
AEVSRKRQEE VERIQAGQKV DKSNADQVAE SADPTDRPID ITPASQLDGE EATGIGLRIV  360
NGQIVEDETT LSIDQTAQAH ANANNDDEVE EENDLAERLN RTTYLNDRRR DPRERIPVYK  420
SKSDPWTEDE TDRFYDALRM FGTDFDIISK MFPPKTRMQV KKKFNREERI DLARINAALL  480
GKENKPMDLE HYAREVGEDV SVYMKYESYE HASQIIRESM KEREEELAAA LKENTETQRQ  540
QDIQQKQQEA VEKKKLEKKE KAAARRANKG RKPGLGTMGG GGPEEVVVET TER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	211	RPLGARRNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	4e-09	MYB_related family protein