PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895804.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 355aa MW: 39687.1 Da PI: 8.6052

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023895804.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.6	6.1e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023895804.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MFQHKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHTIK DASALELQRN TASSSSIMAR 120 SMNEMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQSILEK ACQTLAGENS MPSASYKSIG 180 TQGLGDMGSS AMKDFGSPLN FPSFQDLNIY GGDQLDLQHM DRPPLDGLMM GNNDSICLGK 240 KRNSPYGGSG KSPLIWSDDL RLQDLGSAPS CLRPQDDPFK GDQIQISPPS IDRSSDMDNI 300 SDIYETKPVL QSDEKKFESV KLERPSPRRG PLATDRMNPM INTGSMTQGR NSPFG

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MFQHKKPSTM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHTIK DASALELQRN TASSSSIMAR  120
SMNEMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQSILEK ACQTLAGENS MPSASYKSIG  180
TQGLGDMGSS AMKDFGSPLN FPSFQDLNIY GGDQLDLQHM DRPPLDGLMM GNNDSICLGK  240
KRNSPYGGSG KSPLIWSDDL RLQDLGSAPS CLRPQDDPFK GDQIQISPPS IDRSSDMDNI  300
SDIYETKPVL QSDEKKFESV KLERPSPRRG PLATDRMNPM INTGSMTQGR NSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-133	G2-like family protein