PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895528.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 377aa MW: 41867.2 Da PI: 5.2937

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.4	5.4e-13	266	348	12	92
HTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 12 ksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 k +rlv+pkk ae++ + ++ ++ ++++d++ ++We++l+++ + ++ yvl+ G ke+ + ++gD v+F++++ e+++ XP_023895528.1 266 KMARLVIPKKSAEAYfpKVTEAHGFPIVFQDTQRKEWEFNLRFWVNCNSkmYVLE-GLKEYMTLMQWQAGDKVTFHRIE-PEGKF 348 6689**********977888999*************9666555548888.******************887.44433 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGLALFSS 60 AYEEGNFCDI FHLDADGWRD CATCGKMVHC GCIMSFHVYT VLDFGGVCCI KCFKNSNVAP 120 NQEPSQAPSQ EPSQAPNQEP SFNATPEILQ KQKLGDPFDK VMTGIDCGED PTASLGSPVC 180 HELPQETNVK SLVCISPSQK QDSPARFTEQ FSTDSSNEGD TSCETLIDSE TSEGDSSGKT 240 CSYSQNLSEE SDDEVQEIFR PDADPKMARL VIPKKSAEAY FPKVTEAHGF PIVFQDTQRK 300 EWEFNLRFWV NCNSKMYVLE GLKEYMTLMQ WQAGDKVTFH RIEPEGKFLI ATKKTVKPPP 360 KISNQYSKAR YYHPRLV

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGLALFSS  60
AYEEGNFCDI FHLDADGWRD CATCGKMVHC GCIMSFHVYT VLDFGGVCCI KCFKNSNVAP  120
NQEPSQAPSQ EPSQAPNQEP SFNATPEILQ KQKLGDPFDK VMTGIDCGED PTASLGSPVC  180
HELPQETNVK SLVCISPSQK QDSPARFTEQ FSTDSSNEGD TSCETLIDSE TSEGDSSGKT  240
CSYSQNLSEE SDDEVQEIFR PDADPKMARL VIPKKSAEAY FPKVTEAHGF PIVFQDTQRK  300
EWEFNLRFWV NCNSKMYVLE GLKEYMTLMQ WQAGDKVTFH RIEPEGKFLI ATKKTVKPPP  360
KISNQYSKAR YYHPRLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	3e-26	B3 family protein