PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895525.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 388aa MW: 43083.6 Da PI: 5.3028

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.6	2.6e-14	265	359	1	92
EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k lt+sd+ + +rlv+pkk ae++ + ++ ++ ++++d++ ++We++l+++ + ++ yvl+ G ke+ + ++gD v+F++++ e+ XP_023895525.1 265 FEKFLTSSDADPKmARLVIPKKSAEAYfpKVTEAHGFPIVFQDTQRKEWEFNLRFWVNCNSkmYVLE-GLKEYMTLMQWQAGDKVTFHRIE-PEG 357 899999999998779***********977888999*************9666555548888.******************887.444 PP .. CS B3 91 el 92 ++ XP_023895525.1 358 KF 359 33 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGSAYEEG 60 NFCDIFHLDA DGWRDCATCG KMVHCGCIMS FHVYTVLDFG GVCCIKCFKN SNVAPNQEPS 120 QAPSQEPSQA PNQEPSFNAT PEILQKQKLG DPFDKVMTGI DCGEDPTASL GSPVCHELPQ 180 ETNVKSLVCI SPSQKQDSPA RFTEQFSTDS SNEGDTSCET LIDSETSEGD SSGKTCSYSQ 240 NLSEESDDEV QEIFRPLNSA VIPLFEKFLT SSDADPKMAR LVIPKKSAEA YFPKVTEAHG 300 FPIVFQDTQR KEWEFNLRFW VNCNSKMYVL EGLKEYMTLM QWQAGDKVTF HRIEPEGKFL 360 IATKKTVKPP PKISNQYSKA RYYHPRLV

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGSAYEEG  60
NFCDIFHLDA DGWRDCATCG KMVHCGCIMS FHVYTVLDFG GVCCIKCFKN SNVAPNQEPS  120
QAPSQEPSQA PNQEPSFNAT PEILQKQKLG DPFDKVMTGI DCGEDPTASL GSPVCHELPQ  180
ETNVKSLVCI SPSQKQDSPA RFTEQFSTDS SNEGDTSCET LIDSETSEGD SSGKTCSYSQ  240
NLSEESDDEV QEIFRPLNSA VIPLFEKFLT SSDADPKMAR LVIPKKSAEA YFPKVTEAHG  300
FPIVFQDTQR KEWEFNLRFW VNCNSKMYVL EGLKEYMTLM QWQAGDKVTF HRIEPEGKFL  360
IATKKTVKPP PKISNQYSKA RYYHPRLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-34	B3 family protein