PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895524.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 393aa MW: 43615.3 Da PI: 5.3028

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.6	2.6e-14	270	364	1	92
EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k lt+sd+ + +rlv+pkk ae++ + ++ ++ ++++d++ ++We++l+++ + ++ yvl+ G ke+ + ++gD v+F++++ e+ XP_023895524.1 270 FEKFLTSSDADPKmARLVIPKKSAEAYfpKVTEAHGFPIVFQDTQRKEWEFNLRFWVNCNSkmYVLE-GLKEYMTLMQWQAGDKVTFHRIE-PEG 362 899999999998779***********977888999*************9666555548888.******************887.444 PP .. CS B3 91 el 92 ++ XP_023895524.1 363 KF 364 33 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGLALFSS 60 AYEEGNFCDI FHLDADGWRD CATCGKMVHC GCIMSFHVYT VLDFGGVCCI KCFKNSNVAP 120 NQEPSQAPSQ EPSQAPNQEP SFNATPEILQ KQKLGDPFDK VMTGIDCGED PTASLGSPVC 180 HELPQETNVK SLVCISPSQK QDSPARFTEQ FSTDSSNEGD TSCETLIDSE TSEGDSSGKT 240 CSYSQNLSEE SDDEVQEIFR PLNSAVIPLF EKFLTSSDAD PKMARLVIPK KSAEAYFPKV 300 TEAHGFPIVF QDTQRKEWEF NLRFWVNCNS KMYVLEGLKE YMTLMQWQAG DKVTFHRIEP 360 EGKFLIATKK TVKPPPKISN QYSKARYYHP RLV

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MSFLCAMAAP ASAPSASSSS SPLLCFHCRQ ETSEFKKGWK LRAGGYAGLC IRCGLALFSS  60
AYEEGNFCDI FHLDADGWRD CATCGKMVHC GCIMSFHVYT VLDFGGVCCI KCFKNSNVAP  120
NQEPSQAPSQ EPSQAPNQEP SFNATPEILQ KQKLGDPFDK VMTGIDCGED PTASLGSPVC  180
HELPQETNVK SLVCISPSQK QDSPARFTEQ FSTDSSNEGD TSCETLIDSE TSEGDSSGKT  240
CSYSQNLSEE SDDEVQEIFR PLNSAVIPLF EKFLTSSDAD PKMARLVIPK KSAEAYFPKV  300
TEAHGFPIVF QDTQRKEWEF NLRFWVNCNS KMYVLEGLKE YMTLMQWQAG DKVTFHRIEP  360
EGKFLIATKK TVKPPPKISN QYSKARYYHP RLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	3e-34	B3 family protein