PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895394.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CAMTA

Protein Properties

Length: 884aa MW: 100613 Da PI: 8.2583

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.2	5.4e-52	28	143	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+++nptf rr XP_023895394.1 28 EaSTRWLRPNEIHAILCNYKNFSINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPTFVRR 122 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_023895394.1 123 CYWLLDKSLEHIVLVHYRETQ 143 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK 60 SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV 120 RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY 180 GESAGTVQNH ELRLHEINTL EWDDLLLTND LNNSIVPKGA KVSSIDQTNQ ALNDSLHFGV 240 NNSSAEVSSF SNLTEAIARS DNIYSSFPDS IYDQAMKGQL NANVPRRDSI TMGTNDSLDI 300 LVDDGLQSQD SFGRWINQIM AESPEQIFSI TDVSPAWAFS TEKTKIIVIG FFHKECLHLA 360 KSSLLCVCGD VCVPAETVQV GVYRCFVLPH SFGPVSLFMS FDGHKPISQV LNFEYRIPSS 420 VDPKNLLEEK CKWEDFQYQL RLAYLLFSTS KNLNILSNKV SPNSLKEAKN FAHKTSNILH 480 SFEKFIKSVE ENKVPFPQAK DVLFEHTLKN RLKEYLLERV VERPKTTEHS KTTEYDAQGR 540 GVIHLCAILG YTWAVPLFSW SGLSLDFRDK YGWTALHWAA FCGREKMVAA LLSAGAKPNL 600 VTDPTPKNPG GSTAADLASL KGYEGLAAYL SEKALVEQFK DMSMAGNISG SLDTSATDTV 660 ITENLSEDQI YLKDTLAAYR TTAEAAARIQ AAFRDHSLKV RTKEVEFSAP EDEARSIIAA 720 MKIQHAFRSF ESKKKMAAAA RIQYRFRTWK IRKDFLTMRR HAIKIQAAFR GFQVRRQYRK 780 ILWSVGVLEK AVLRWRLKRR GFRGFQVDPM EPVPDQRPES DTEEDFYRAS RKQAEERVER 840 SVVRVQAMFR SKKAQEEYRR MKMTHNQARL EYEGFLDSDT DMTY

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MMEGQLVGSE IHGFHTLQDL DLGNIREEAS TRWLRPNEIH AILCNYKNFS INVKPVNLPK  60
SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GDEERIHVYY AHGQDNPTFV  120
RRCYWLLDKS LEHIVLVHYR ETQELQGSPG TPVNSNSSSG SSAPWLLTEE LDSGGNHAHY  180
GESAGTVQNH ELRLHEINTL EWDDLLLTND LNNSIVPKGA KVSSIDQTNQ ALNDSLHFGV  240
NNSSAEVSSF SNLTEAIARS DNIYSSFPDS IYDQAMKGQL NANVPRRDSI TMGTNDSLDI  300
LVDDGLQSQD SFGRWINQIM AESPEQIFSI TDVSPAWAFS TEKTKIIVIG FFHKECLHLA  360
KSSLLCVCGD VCVPAETVQV GVYRCFVLPH SFGPVSLFMS FDGHKPISQV LNFEYRIPSS  420
VDPKNLLEEK CKWEDFQYQL RLAYLLFSTS KNLNILSNKV SPNSLKEAKN FAHKTSNILH  480
SFEKFIKSVE ENKVPFPQAK DVLFEHTLKN RLKEYLLERV VERPKTTEHS KTTEYDAQGR  540
GVIHLCAILG YTWAVPLFSW SGLSLDFRDK YGWTALHWAA FCGREKMVAA LLSAGAKPNL  600
VTDPTPKNPG GSTAADLASL KGYEGLAAYL SEKALVEQFK DMSMAGNISG SLDTSATDTV  660
ITENLSEDQI YLKDTLAAYR TTAEAAARIQ AAFRDHSLKV RTKEVEFSAP EDEARSIIAA  720
MKIQHAFRSF ESKKKMAAAA RIQYRFRTWK IRKDFLTMRR HAIKIQAAFR GFQVRRQYRK  780
ILWSVGVLEK AVLRWRLKRR GFRGFQVDPM EPVPDQRPES DTEEDFYRAS RKQAEERVER  840
SVVRVQAMFR SKKAQEEYRR MKMTHNQARL EYEGFLDSDT DMTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein