PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895294.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 343aa MW: 39021.6 Da PI: 4.5551

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.4	2.2e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yL++k++g ++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v+ XP_023895294.1 6 LPPGFRFHPTDEELVAYYLHRKINGGTIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRPVH 99 79**************************.99**********95345556888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ vg+kktLv+y+grap+g +t+Wvmheyrl XP_023895294.1 100 S-HKHPVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAPMSLPPGF RFHPTDEELV AYYLHRKING GTIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS HKHPVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLIDSMCSS SASSNLKDSY ALCRIFKKTI QIPKAKEKEQ TENLENGNSV 180 SALDEQLLGD DTSGLETFQG REAEDENFIQ DYSKFPSDTS SSDLTQGTPA ETGIADDLQA 240 PFASDEANSA ANLYSLGVDY PSNLIQDMQI QSYTSLDYQL PYPPLELEDF PQINLTETKP 300 VKPEIIDEYM SYDKIRDCMN GTLEEIFSLC SSLDNPVALS LQE

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAPMSLPPGF RFHPTDEELV AYYLHRKING GTIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRPVHS HKHPVGMKKT LVYYRGRAPH  120
GIRTNWVMHE YRLIDSMCSS SASSNLKDSY ALCRIFKKTI QIPKAKEKEQ TENLENGNSV  180
SALDEQLLGD DTSGLETFQG REAEDENFIQ DYSKFPSDTS SSDLTQGTPA ETGIADDLQA  240
PFASDEANSA ANLYSLGVDY PSNLIQDMQI QSYTSLDYQL PYPPLELEDF PQINLTETKP  300
VKPEIIDEYM SYDKIRDCMN GTLEEIFSLC SSLDNPVALS LQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54330.1	1e-113	NAC family protein