PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895276.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 359aa MW: 41613.6 Da PI: 6.7516

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.2	5.1e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_023895276.1 7 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQElcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 100 69**************************.9***********954555442556******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_023895276.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKIS SRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETEEN GTPQEEGWVV CRVFKKRIAT VRKVSEQGSP CWYDDQVSFM 180 PDLDSPKHNS QSNLMYQLPY CKKELDLVPY HAPHDHFLQL PLLESPKLLQ SAPTISSNSL 240 APYVIDINHA TTLQSSSLSQ EEQIQHQPHE QNFYVAYANN NCNGQAVDQV TDWRVLDKFV 300 ASQLSHEDAS KQNGYSTGTN NIYHTTNSTN VFVRRMDKQE MVPESVSMSS SSGQIELWK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKIS SRRIDLDVIK DVDLYKIEPW DLQELCRIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETEEN GTPQEEGWVV CRVFKKRIAT VRKVSEQGSP CWYDDQVSFM  180
PDLDSPKHNS QSNLMYQLPY CKKELDLVPY HAPHDHFLQL PLLESPKLLQ SAPTISSNSL  240
APYVIDINHA TTLQSSSLSQ EEQIQHQPHE QNFYVAYANN NCNGQAVDQV TDWRVLDKFV  300
ASQLSHEDAS KQNGYSTGTN NIYHTTNSTN VFVRRMDKQE MVPESVSMSS SSGQIELWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-118	NAC family protein