PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023895274.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 260aa    MW: 29170.1 Da    PI: 8.6375
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023895274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-202979256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g+
  XP_023895274.1 29 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARRLRGP 79
                    69*******.**********883....5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKRGRGAAAN KTPAAAAAAA VPTAEKEQRY RGVRKRPWGR FAAEIRDPWK KTRVWLGTFD  60
SAEDAARAYD AAARRLRGPK AKTNFPPSSS SSPNIHHQQQ QQQQHLNRTA NYGPPFLDHH  120
RFYDNEDGND EQHQHQNHQR MVIDPQRPTC SGMSSTVESF SGPRPTPQKA PRPMEAVMDR  180
RKKHHPRTPP VVPEDCHSDC DSSSSVIDGN NNNNNNINDN DDNDIASSSY SNLLCRKTPL  240
PFDLNLPPLD LDHDVDFVGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-30ERF family protein