PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023895273.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 270aa MW: 30220.3 Da PI: 7.9123 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 29 | 79 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a++aa+++l+g+ XP_023895273.1 29 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARRLRGP 79 69*******.**********883....5**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MKRGRGAAAN KTPAAAAAAA VPTAEKEQRY RGVRKRPWGR FAAEIRDPWK KTRVWLGTFD 60 SAEDAARAYD AAARRLRGPK AKTNFPPSSS SSPNIHHQQQ QQQQHLNRTA NYGPPFLDHH 120 RFYDNEDGND EQHQHQNHQR MVIDPQRPTC SGMSSTVESF SGPRPTPQKA PRPMEAVMDR 180 RKKHHPRTPP VVPEDCHSDC DSSSSVIDGN NNNNNNINDN DDNDIASSSY SNLLCRKTPL 240 PFDLNLPPLD LDHDVDFVGD DLNCTTALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 6e-31 | ERF family protein |