PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023895157.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 401aa MW: 45781.1 Da PI: 6.757

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023895157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.7	5.7e-50	36	161	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ XP_023895157.1 36 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSEN 129 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_023895157.1 130 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 161 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MAIAATTSNM SNDENNINNN KAADDDDDDH EHDMVMPGFR FHPTEEELVE FYLRRKVEGK 60 RFNVELITFL DLYRYDPWEL PALAAIGEKE WYFYVPRDRK YRNGDRPNRV TTSGYWKATG 120 ADRMIRSENF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPQHETERYQ KAEISLCRVY 180 KRAGVEDHPS LPRSLPSRAS SSRVAQSSRK QHDLVQSSIL DNFQAFGGVL QSQQIEEEKL 240 KEADGISSST NNSDDVTTAL GLSKHNNNAY RSAPISPTQL GLPAPMEEEG MLMNHSKQAC 300 NSLVPTCTTF FTTAGSSSIN AVDDLHKLVH YQQASSMIGQ QQQHYYNVHH HPYQLPSLLP 360 QSSQPLSLNT LPNMLPTAFS DRLWEWNPIP EANREYTNPF K

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MAIAATTSNM SNDENNINNN KAADDDDDDH EHDMVMPGFR FHPTEEELVE FYLRRKVEGK  60
RFNVELITFL DLYRYDPWEL PALAAIGEKE WYFYVPRDRK YRNGDRPNRV TTSGYWKATG  120
ADRMIRSENF RSIGLKKTLV FYSGKAPKGI RTSWIMNEYR LPQHETERYQ KAEISLCRVY  180
KRAGVEDHPS LPRSLPSRAS SSRVAQSSRK QHDLVQSSIL DNFQAFGGVL QSQQIEEEKL  240
KEADGISSST NNSDDVTTAL GLSKHNNNAY RSAPISPTQL GLPAPMEEEG MLMNHSKQAC  300
NSLVPTCTTF FTTAGSSSIN AVDDLHKLVH YQQASSMIGQ QQQHYYNVHH HPYQLPSLLP  360
QSSQPLSLNT LPNMLPTAFS DRLWEWNPIP EANREYTNPF K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-106	NAC family protein