PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023895064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 209aa MW: 22664.9 Da PI: 10.6394 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 83.9 | 1.3e-26 | 145 | 209 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++ll+++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wk XP_023895064.1 145 RYDSSLGLLTKKFINLLKQAEDGNLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWK 209 6899******************************...99..****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MSGGARAPNR PAPPPPTVAS QILPPPPPMK RNLAVLASTK PPFVPPDDYH RFSSVVADRE 60 AEALVVRSPL LKRKNGTDDN EVQSIDWTNS PGYTSVVNSP LKTPVSAKGG RIYNRSKGTK 120 GNRSGPQTPV ANAGSPSPLT PGSCRYDSSL GLLTKKFINL LKQAEDGNLD LNKAAETLEV 180 QKRRIYDITN VLEGIGLIEK KLKNRIHWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.1 | 4e-68 | E2F/DP family protein |