PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023894847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 214aa MW: 23984.3 Da PI: 4.9597 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.7 | 1e-13 | 108 | 211 | 3 | 98 |
EE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkl.iyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 + ps+ ++r +lp+ + ++ +++k + t++l+ r W +kl iy+++ g+ +v+++GW+ +++n L++gD++vF+l+ r XP_023894847.1 108 VTIHPSYIDGKDRAILPRAII-NYlpregftkDYNKGSILTVKLQ-VVDRLWPMKLyIYERSVGSsCVISAGWSTVARENTLRVGDVCVFELIMR 200 556677777888888888877.55688877765555444444443.3569*****95555555556***************************99 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 ++ l+v++fr XP_023894847.1 201 DDVVLKVHIFR 211 99999***997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
FRYIGNSHFD VLIFDATATE IDYTLDDQAQ VCRMEDNESD DDSIEIMDDF TKGEGTGLAH 60 GVGGNRVGCT SSSLVKLELH QCPKKDGGVA ENLVRANAFK LENPLFTVTI HPSYIDGKDR 120 AILPRAIINY LPREGFTKDY NKGSILTVKL QVVDRLWPMK LYIYERSVGS SCVISAGWST 180 VARENTLRVG DVCVFELIMR DDVVLKVHIF RCIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-16 | B3 family protein |