PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894515.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 296aa MW: 34440.6 Da PI: 7.4267

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164	5.4e-51	20	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++kve+k++++ e ik++diyk++PwdLpk + ++kewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+++s XP_023894515.1 20 MLPGFRFHPTDEELVGFYLRRKVEKKPISI-ELIKQIDIYKYDPWDLPKVSTVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSV 113 579*************************.89***********8777899**********************************98 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_023894515.1 114 qeTHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 148 555566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEVAKVSSTE NNNDEDNEVM LPGFRFHPTD EELVGFYLRR KVEKKPISIE LIKQIDIYKY 60 DPWDLPKVST VGDKEWYFFC IRGRKYRNSI RPNRVTGSGF WKATGIDKPI YSVQETHECI 120 GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP NGKCSNLTNA DSAQEAEVWT LCRIFKRIPS 180 YKKYAPNWKE TSTKQNPTDS SPKTCSLDSD NSEPYVSFED SVFQQHNECK PYIQQVDERN 240 HYFVGHLNTL NQVPFTPSYS NFWNPSGDDF FTKGNWDELR PVVQLATDPS QVYNCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-101	NAC family protein