PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894433.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 337aa    MW: 38896.7 Da    PI: 7.6184
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.53.1e-54121411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL++  ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  XP_023894433.1  12 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAI 105
                     69****************************.9***************952444443456************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++++ +g++ktLvfy+grap+g+ktdW+mheyrl
  XP_023894433.1 106 HHSNTKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 141
                     **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MMSAAGNGQV TVPPGFRFHP TDEELLYYYL RKKVSYEAID LDVIREVDLN KLEPWDLKEK  60
CRIGSGPQNE WYFFSHKDKK YPTGTRTNRA TTAGFWKATG RDKAIHHSNT KRIGMRKTLV  120
FYTGRAPHGQ KTDWIMHEYR LDDDNSEIQE DGWVVCRVFK KKNHNRGYQL PEVAEEEHLS  180
SHMKASGSAP PLQEPKQNNI QALYDYTTFD GSMHLPQMFS PESVVVPPSL ISPMSLNTTE  240
IECSQNLLRL TTASGCGLMQ PERYNGDWSF LDKLLASHQT QMDHHHHHHH HQHHQHPQTK  300
CHPSSLQLAD HVGTSTHHQK FPFQYLGCET DILKFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-118NAC family protein