PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894361.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 355aa MW: 40270.5 Da PI: 7.2345

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.4	4.6e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ ++i evd++++ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ XP_023894361.1 16 LPPGFRFHPTDEELISHYLYEKVIDTSFSA-RAIGEVDLNRSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 108 79************************99.89***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wvmheyrle XP_023894361.1 109 GKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MENFCGVCKE EEQMDLPPGF RFHPTDEELI SHYLYEKVID TSFSARAIGE VDLNRSEPWE 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKLSVHNL PKTARNEWVI SRIFQKTSGG KKIHISGIVR 180 LETELDPSNL PPLMDSSPYT GKTQSVSESA YVPCFSNFMD AQGNQEGMMN YLNNSLSGVS 240 SYRTDILPRI PISSSLYSAQ TIPLSANQQF PGSVAMQDHS ILRALLGNQG SNLRQSFKTE 300 REMVNVSHET AMTTDMNTEI SSVVSHLEMG RRPFDNQEAP STSAGPVDLD NLWSY

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MENFCGVCKE EEQMDLPPGF RFHPTDEELI SHYLYEKVID TSFSARAIGE VDLNRSEPWE  60
LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR LEGKLSVHNL PKTARNEWVI SRIFQKTSGG KKIHISGIVR  180
LETELDPSNL PPLMDSSPYT GKTQSVSESA YVPCFSNFMD AQGNQEGMMN YLNNSLSGVS  240
SYRTDILPRI PISSSLYSAQ TIPLSANQQF PGSVAMQDHS ILRALLGNQG SNLRQSFKTE  300
REMVNVSHET AMTTDMNTEI SSVVSHLEMG RRPFDNQEAP STSAGPVDLD NLWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-168	NAC family protein