PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894279.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HB-other
Protein Properties Length: 371aa    MW: 40785.8 Da    PI: 7.6094
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.64.2e-081374655
                    S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
        Homeobox  6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                    +ft++++ e+e+  ++  n  ps++    LA+k            ++ +qV +WFqNrR+  
  XP_023894279.1 13 RFTQNEVAEMEAILQQhnNTMPSRDVLVSLADKFsespdrkgkiTVQMKQVWNWFQNRRYAI 74
                    69*************766999*********************99999************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MGRPPSNGGP AFRFTQNEVA EMEAILQQHN NTMPSRDVLV SLADKFSESP DRKGKITVQM  60
KQVWNWFQNR RYAIRAKLSK APGKLNVSPM HRDDSTPVRN VPQSIAAPIP APSVPSAGRG  120
APENSVMEFE AKSGRDGAWY DVTTFLSHRY LETGDPEVLV RFAGFGPEED EWINIRKHVR  180
PRSLPCESSE CVAVLPGDLI LCFQEGKEQA LYFDAHVLDA QRRRHDVRGC RCRFLVRYAH  240
DQSEEIVPLR KVCRRPESDH RLQQLHAVNE AASIDQQKTS LDPSGVSGLR VATPAETLQQ  300
QRYADAMLVS TGPALHANVS VATHTVIPES KQAETSNTNI AGNANAPPGA ALVSNTALST  360
ALGGSETRPE A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-129HB-other family protein