PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894278.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 390aa MW: 43152.9 Da PI: 8.0849

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.8	4.9e-05	75	93	37	55
CTS-HHHHHHHHHHHHHHH CS Homeobox 37 lgLterqVkvWFqNrRake 55 + ++ +qV +WFqNrR+ XP_023894278.1 75 ITVQMKQVWNWFQNRRYAI 93 567899**********865 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MEALPSASHK TRLQRWKLFC NNTIIRCHHV MSLCHLQISS GVTCLFHYFV LLTLELTCDA 60 FVFGSSESPD RKGKITVQMK QVWNWFQNRR YAIRAKLSKA PGKLNVSPMH RDDSTPVRNV 120 PQSIAAPIPA PSVPSAGRGA PENSVMEFEA KSGRDGAWYD VTTFLSHRYL ETGDPEVLVR 180 FAGFGPEEDE WINIRKHVRP RSLPCESSEC VAVLPGDLIL CFQEGKEQAL YFDAHVLDAQ 240 RRRHDVRGCR CRFLVRYAHD QSEEIVPLRK VCRRPESDHR LQQLHAVNEA ASIDQQKTSL 300 DPSGVSGLRV ATPAETLQQQ RYADAMLVST GPALHANVSV ATHTVIPESK QAETSNTNIA 360 GNANAPPGAA LVSNTALSTA LGGSETRPEA

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MEALPSASHK TRLQRWKLFC NNTIIRCHHV MSLCHLQISS GVTCLFHYFV LLTLELTCDA  60
FVFGSSESPD RKGKITVQMK QVWNWFQNRR YAIRAKLSKA PGKLNVSPMH RDDSTPVRNV  120
PQSIAAPIPA PSVPSAGRGA PENSVMEFEA KSGRDGAWYD VTTFLSHRYL ETGDPEVLVR  180
FAGFGPEEDE WINIRKHVRP RSLPCESSEC VAVLPGDLIL CFQEGKEQAL YFDAHVLDAQ  240
RRRHDVRGCR CRFLVRYAHD QSEEIVPLRK VCRRPESDHR LQQLHAVNEA ASIDQQKTSL  300
DPSGVSGLRV ATPAETLQQQ RYADAMLVST GPALHANVSV ATHTVIPESK QAETSNTNIA  360
GNANAPPGAA LVSNTALSTA LGGSETRPEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-102	HB-other family protein