PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023894274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 28003.7 Da PI: 5.4637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.6 | 1.5e-13 | 32 | 74 | 9 | 55 |
AP2 9 dkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ +grWvAeI+d ++ r+ lg+++taeeAa+a+++a+ l+g XP_023894274.1 32 RP-SGRWVAEIKDtI----QKIRVCLGTYDTAEEAARAYDEAACLLRG 74 77.7*********33....35**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MVSDQMMEQS ATLAAPGGAR RNGKQYIGEG QRPSGRWVAE IKDTIQKIRV CLGTYDTAEE 60 AARAYDEAAC LLRGANIRTN FYPCSPTHLR PALPSKITNL LLLRLQARHI ASASMVATSL 120 PISNRKLNTS VGVTNSDNVT ESFESSSVRL AEGWARALDM DDGKSQGGGK EEVGEKEGCD 180 MEHIDFQFLD AVVSTCYCSP FKIAEEMAEP VEQETYGNEP SLLGETMKRM KYERKFSASL 240 YAFNGIPECL RLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 6e-16 | ERF family protein |