PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894102.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 271aa    MW: 30812.7 Da    PI: 6.8802
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-2095144255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa a+++a+ +++g
  XP_023894102.1  95 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAALAYDQAAMRIRG 144
                     69*******.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MCGGAIISDF VDIKPRGRRT TTEDLWSELD TASDLFGFNS NSALDDFPNS FFHLKAPQKP  60
KQLEKVRSEK RSDTDEKAKQ VAKKEKKRER TRKNVYRGIR QRPWGKWAAE IRDPQKGVRV  120
WLGTFNTAEE AALAYDQAAM RIRGDKAKLN FAHHRHQPPP PSTPEPPPPA AKKRCIFPES  180
SETSFETTES PPVLLQPLIQ NEICCKNEVA QFDHGFELKD QISSLESFLG LEPEPEPSLV  240
SGSGSESMES VDLWMLDDLV THHQQQRQLL Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.15e-39ERF family protein