PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893610.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 285aa MW: 32980.5 Da PI: 8.7509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.6	1.4e-54	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+ +yL++++++k++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+++s XP_023893610.1 9 LPPGFRFHPTDEELIIYYLRNQATSKPCPV-SIIPEVDIYKFDPWQLPEKAEFGENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYS- 101 79**************************.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + vg+kk Lvfykgr pkg ktdW+mheyrl XP_023893610.1 102 GAKYVGVKKALVFYKGRPPKGIKTDWIMHEYRL 134 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MEGRARSDLP PGFRFHPTDE ELIIYYLRNQ ATSKPCPVSI IPEVDIYKFD PWQLPEKAEF 60 GENEWYFFTP RDRKYPNGVR PNRATVSGYW KATGTDKAIY SGAKYVGVKK ALVFYKGRPP 120 KGIKTDWIMH EYRLTDSRKQ PKKLLGSMRL DDWVLCRIYK KRHMAKVLDP KVEESLPAPI 180 DVTLPNDAID QNMSKFPRPC SLSHLLDLEY LGPISQLLCD NSYNSNFDFQ NFIGNAGTDN 240 AERPQQGEIQ YQQYLDSGKF QLNQGGIFSQ PMFLNPVYDV RGFER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-115	NAC family protein