PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023893375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 25251.7 Da PI: 4.9365 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.8 | 1.1e-09 | 164 | 208 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ r RR++i ++ +eL +l+P + K++ ae+L+ A +Y+k+Lq XP_023893375.1 164 SIAARERRRKITEKTQELGRLIPGC-----SKMNTAEMLQAASKYVKYLQ 208 67889*******************9.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MALSTYTELG TLQHLNTQIS FQQRQAELAG ELLSYSNNFE LQNTLLHPLY DQESFLHPEE 60 CYTHLLPYLS SSCEPFISLS EMLTPPQDFE PCSIPKRQRC HENQFSLDFT PTFFDGLVPN 120 PCMVAEVLPE LFSQLPEYGI PQVDCTQNVE SSKKMNERSV SAQSIAARER RRKITEKTQE 180 LGRLIPGCSK MNTAEMLQAA SKYVKYLQAQ VRILELMGSF Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 2e-21 | bHLH family protein |