PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893162.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 904aa MW: 99633.1 Da PI: 7.0506

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.2e-19	329	429	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_023893162.1 329 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRID-PGGK 421 99************************555556677***********99899999999.*******************987.8998 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++r+ XP_023893162.1 422 LVMGFRRA 429 99999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 904 aa Download sequence
MTNSRLGPKD FGQDFDFGLM GSKICMNASC KATNTHEWKR GWPLRSGGFA DLCHKCGSFF 60 EDLLFCDKFH LEETGWRECS LCNKRIHCGC IMSKPLYEYL DFGGVECISC AKSSGLYSIW 120 RGEIPNGFGS FTLNNAGDSL SSPFEKKLVS EGVNEGKLMQ LCRIAEDNAP NLLPQSQTGE 180 ANASQVGTGF SNVTQPSVGS VTFAKSESSR QLLEGKDMHE SLTQPSLSMT LGTPNFMIPF 240 SGGPLDEQSK TPSPLQKGQR SRPILPKPLK SGLSASSETN KGVVQMRIAR PPAEGRGKNQ 300 LLPRYWPRIT DQELEKLSGD LNSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPISQ 360 SEGLPLRIQD VKGNEWTFQF RFWPNNNSRM YVLEGVTPCI QSMQLRAGDT VTFSRIDPGG 420 KLVMGFRRAS NTVDTQDAHT SALPNGTPSG EASFSGVIEN LPSGNGYSGL FQTMKGSTEP 480 HLILSENLHS GDGDIRLHTS DNHGLGTNED SLQQPMPISE KKRTRNIGAK SKRLLMNSEE 540 ALELRLTWEE AQDLLRPPPS VKPSVVTIED HEFEEYDEPP VFGKRTIFTA RPSRGQEQWA 600 QCDDCSKWRR LPVEVLLPPK WTCSENEWDS SRCSCSVLEE ISQKELENLL RASKDFKKRR 660 IVGSHKSAQE REPSGLDALA SAAVLGDNVG DSGEPSVGAT TKHPRHRPGC SCIVCIQPPS 720 GKGKHNPTCT CNVCMTVKRR FKTLMLRKKK RQSEREAETA QKDHKHPRNK SEMNGKPKDA 780 QLPTNHLENE ASQSRIKAEV AGTSNGQIDL NSHPNREDMQ LDLDVPGMSL LSLVQAASIP 840 LEDYMEQRMT SFTCDQQGSL GSGIHPQVSG ENKKRLSDEG SLASGVWEHE SRGDGGSYHE 900 SNLD

Sequence ? help Back to Top

Protein Sequence Length: 904 aa Download sequence

MTNSRLGPKD FGQDFDFGLM GSKICMNASC KATNTHEWKR GWPLRSGGFA DLCHKCGSFF  60
EDLLFCDKFH LEETGWRECS LCNKRIHCGC IMSKPLYEYL DFGGVECISC AKSSGLYSIW  120
RGEIPNGFGS FTLNNAGDSL SSPFEKKLVS EGVNEGKLMQ LCRIAEDNAP NLLPQSQTGE  180
ANASQVGTGF SNVTQPSVGS VTFAKSESSR QLLEGKDMHE SLTQPSLSMT LGTPNFMIPF  240
SGGPLDEQSK TPSPLQKGQR SRPILPKPLK SGLSASSETN KGVVQMRIAR PPAEGRGKNQ  300
LLPRYWPRIT DQELEKLSGD LNSTIVPLFE KVLSASDAGR IGRLVLPKAC AEAYFPPISQ  360
SEGLPLRIQD VKGNEWTFQF RFWPNNNSRM YVLEGVTPCI QSMQLRAGDT VTFSRIDPGG  420
KLVMGFRRAS NTVDTQDAHT SALPNGTPSG EASFSGVIEN LPSGNGYSGL FQTMKGSTEP  480
HLILSENLHS GDGDIRLHTS DNHGLGTNED SLQQPMPISE KKRTRNIGAK SKRLLMNSEE  540
ALELRLTWEE AQDLLRPPPS VKPSVVTIED HEFEEYDEPP VFGKRTIFTA RPSRGQEQWA  600
QCDDCSKWRR LPVEVLLPPK WTCSENEWDS SRCSCSVLEE ISQKELENLL RASKDFKKRR  660
IVGSHKSAQE REPSGLDALA SAAVLGDNVG DSGEPSVGAT TKHPRHRPGC SCIVCIQPPS  720
GKGKHNPTCT CNVCMTVKRR FKTLMLRKKK RQSEREAETA QKDHKHPRNK SEMNGKPKDA  780
QLPTNHLENE ASQSRIKAEV AGTSNGQIDL NSHPNREDMQ LDLDVPGMSL LSLVQAASIP  840
LEDYMEQRMT SFTCDQQGSL GSGIHPQVSG ENKKRLSDEG SLASGVWEHE SRGDGGSYHE  900
SNLD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	738	749	KRRFKTLMLRKK
2	738	751	KRRFKTLMLRKKKR
3	748	778	KKKRQSEREAETAQKDHKHPRNKSEMNGKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein