PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023892883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 119aa MW: 13457.4 Da PI: 7.58 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.6 | 2.9e-08 | 10 | 53 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W++eE +++ +++k+ + + +++Iar ++ ++ ++k+++ XP_023892883.1 10 VWSPEENKKFEELIKEIPLDcphIFEKIARALP-SKSILDIKEHY 53 7********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MNHKSPPRAV WSPEENKKFE ELIKEIPLDC PHIFEKIARA LPSKSILDIK EHYGSLIEGI 60 FIGHRPSFIE VPNCGNSEVG EIVEEIPNKK KKGKELAPAV EGKTQEEKRN GGSMDQRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05790.1 | 1e-07 | MYB family protein |