PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023892765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 237aa MW: 27708.2 Da PI: 9.3491 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63 | 6e-20 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v ++G g+W+++ar g++R++k+c++rw +yl XP_023892765.1 16 KGPWTPEEDKLLSEYVSLHGEGRWSSVARSAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++ +G++ W+tIar+++ gRt++++k++w+++ XP_023892765.1 69 RGQLTPQEEGIIIELHAIWGNK-WSTIARYLP-GRTDNEIKNYWRTH 113 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MATMIGWGMQ EQGWRKGPWT PEEDKLLSEY VSLHGEGRWS SVARSAGLNR SGKSCRLRWV 60 NYLRPGLKRG QLTPQEEGII IELHAIWGNK WSTIARYLPG RTDNEIKNYW RTHFKKKEKS 120 SQKQEKRKQE ILKQKQQQQL QLQLQQQQQV QRPQEHDIKT VFSQAETSTE EMTSETHGIR 180 QQMVLKNPNS EDQCTPKMYQ DFASWFDTVG DDGLSSGLWN FADDYTVAWM RQVCATN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 4e-64 | MYB family protein |