PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023892688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 371aa MW: 41872 Da PI: 6.6108 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+d+++++G g+W+ ++ g++R++k+c++rw +yl XP_023892688.1 14 KGPWTVEEDQKLIDYIQKHGHGRWRILPKNAGLKRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ XP_023892688.1 67 RGRFSFEEEETIIQLHCVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MGKVPCCDKE GLKKGPWTVE EDQKLIDYIQ KHGHGRWRIL PKNAGLKRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHCVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHTPRL DLLELTSVLN SSLYNSSQLN LPSLLGIGPI LNPNMLSLAT ALFSSQCRNT 180 ENITSQYLQQ NQLDQNLVQN QLQSTQPVQL NTINSSSQAN QLQCPVQDIQ PCATSNIIST 240 PFSSESQFTQ VKMEQLPPNL TNFSYQNSPT KLWQNNGEHP NDFAVSDYSF DPVIDPQFEN 300 QILQSNNDES IPNFSFGTLI STPSTSPTPL NSSSTTTYAN CSTEDERDSY CSNILLYDMP 360 NSLNASGVLH M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 2e-97 | MYB family protein |