PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892647.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 291aa MW: 33851.9 Da PI: 8.0779

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.2	5.9e-48	17	143	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v gk+++ ++i ++iy+++PwdLp+ +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s XP_023892647.1 17 PGFRFHPTEEELLDFYLKNMVYGKRMHY-DIIGFLNIYHHDPWDLPRLAKIGEREWYFFVPRDRKHGSGGRPNRTTENGFWKATGSDRKIVSLsd 110 9************************9.99***********8888899*********************************99766 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl XP_023892647.1 111 PKRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 143 6778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MAAMSGMDEM RPELELPGFR FHPTEEELLD FYLKNMVYGK RMHYDIIGFL NIYHHDPWDL 60 PRLAKIGERE WYFFVPRDRK HGSGGRPNRT TENGFWKATG SDRKIVSLSD PKRIIGLRKT 120 LVFYKGRAPR GSKTDWVMNE YRLPDSCPLP KDIVLCKIYR KATSLKVLEQ RAAMEEEMKF 180 HASPSPPPSS SHETISFCTP QEDQLMAITP VQNVVFKQEV EDVVAKEEKK DDRPLENKVS 240 PTPLQFPLGK EKLPELQVPK LAMDWNQDPF WTQLNSPWLQ NLTPYANILN F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-119	NAC family protein