PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892529.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 301aa    MW: 32946.9 Da    PI: 9.9911
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-20152201255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +grW AeIrd       + r++lg+f+taeeAa+a++aa+++l+g
  XP_023892529.1 152 SYRGVRKRP-WGRWSAEIRDrI----GKCRHWLGTFDTAEEAARAYDAAARRLRG 201
                     69*******.**********33....24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MYNNHHALQF QTVPFFPKSE PIFSPDTFMF LTETSCFYGS FWDTQFSIPS VSASNHLKFL  60
NPLPISADIS ADLSLCEINN HEAKPETEME MEIPPVLDGI AAVVGQHVLF GGKNTKKSEN  120
HNNNKTENSG LVSISERFGA EKKNSSGGPQ KSYRGVRKRP WGRWSAEIRD RIGKCRHWLG  180
TFDTAEEAAR AYDAAARRLR GSKARTNFEI PSVLPLVVAS SSTSTSSCSS SDANKRAKKK  240
ANNKKAAGKN GRKCSVVTSV AQLFSSNSAI AGRDGNNVEL ELKLGVNFGN RSSTSTTTPY  300
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.16e-29ERF family protein