PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023892394.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 350aa MW: 39169.3 Da PI: 9.1406

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023892394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.4	2e-55	28	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +k+++ +++ ++i +vd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_023892394.1 28 LPPGFRFHPTDEELITYYLMNKLSDASFTG-KAIGDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNS 121 79***********************999.88***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfy+grap+gekt+Wvmheyr+ XP_023892394.1 122 qTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 155 67788*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MQKLQSTQKG KEQSKEMADQ DHAKEETLPP GFRFHPTDEE LITYYLMNKL SDASFTGKAI 60 GDVDLNKCEP WELPGKAKMG EKEWYFFSLR DRKYPTGVRT NRATNTGYWK TTGKDKEIFN 120 SQTSELVGMK KTLVFYRGRA PRGEKTNWVM HEYRIHSRAA FRNSKQDEWV VCRVFQKSAG 180 AKKFPSTQSR AVNPYNLEIG PSVVPQPMMQ LGDPGQFPYG KSYMSNAELA ELTRAFRGSG 240 TGSPSVNLQQ MQPQMNYPLP LGGGCFTISG LNLNLGGGGT QQVLRPMAPA QPPLGMHQQD 300 VANSSMMTSS SLAAETAVYG GDQMNHSNAP GNRYIGMDHC MDLDNYWPPY

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MQKLQSTQKG KEQSKEMADQ DHAKEETLPP GFRFHPTDEE LITYYLMNKL SDASFTGKAI  60
GDVDLNKCEP WELPGKAKMG EKEWYFFSLR DRKYPTGVRT NRATNTGYWK TTGKDKEIFN  120
SQTSELVGMK KTLVFYRGRA PRGEKTNWVM HEYRIHSRAA FRNSKQDEWV VCRVFQKSAG  180
AKKFPSTQSR AVNPYNLEIG PSVVPQPMMQ LGDPGQFPYG KSYMSNAELA ELTRAFRGSG  240
TGSPSVNLQQ MQPQMNYPLP LGGGCFTISG LNLNLGGGGT QQVLRPMAPA QPPLGMHQQD  300
VANSSMMTSS SLAAETAVYG GDQMNHSNAP GNRYIGMDHC MDLDNYWPPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-115	NAC family protein