PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023892356.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 174aa    MW: 18582.1 Da    PI: 9.8298
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023892356.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-20959256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  XP_023892356.1  9 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 59
                    69*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MASSAREGHY RGVRKRPWGR YAAEIRDPWK KTRVWLGTFD TPEEAALAYD GAARSLRGAK  60
AKTNFPPTVP TTVGGGGGGL PLPLDLNLPS SNRLVLGEFL HTGVLKDINC VATESDSSSS  120
YQVKREPQVS ASAVTVAAVG PTHHVPESSA TASFLGLVRR GLPVDLNEPP PLWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-43ERF family protein